PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01615.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 277aa    MW: 31113.7 Da    PI: 9.3653
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01615.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12128174455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h + Er+RR++i + f  L  ++P +     kK +Ka++L+ A++Y+k+Lq
  KHN01615.1 128 DHIMSERKRRENIAKLFIALSAVIPVL-----KKTDKASVLKTAIDYVKYLQ 174
                 5999***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.833124173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16128187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.27E-10129178No hitNo description
PfamPF000101.1E-9129174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-16129191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-13130179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MHSLVEVFKG ENLVQQEKSC KSHPCDSNIT KESTTILLRN PINDSSSLEK NPGFDNRSSL  60
KQHASQDEPL FSSSSMPYTL SFEDSTAVPY VLNKTCQCYH GENSKETQEE PKNNRKSKRG  120
RSSSEIQDHI MSERKRRENI AKLFIALSAV IPVLKKTDKA SVLKTAIDYV KYLQKRVKDL  180
EEESKKRKVE YAVCFKTNKY NIGTVVDDSD IPINIRPKIE ARVSGKDALI KVMCEKRKDI  240
VAKILGKLAA LNLSIVCCNV LPFANSALNI TCIAQGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132137ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0968180.0BT096818.1 Soybean clone JCVI-FLGm-15B24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001240220.10.0uncharacterized protein LOC100799087
TrEMBLA0A0B2NX290.0A0A0B2NX29_GLYSO; Transcription factor bHLH25
STRINGGLYMA07G13423.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-35bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]